CDS

Accession Number TCMCG077C21506
gbkey CDS
Protein Id KAF5746762.1
Location join(9071395..9071470,9071938..9072038,9072264..9072385,9072730..9072780,9073509..9073628,9073702..9073821,9074391..9074532,9074724..9074894,9075048..9075203,9075286..9075392,9076066..9076156,9076310..9076451,9076539..9076695,9076872..9076988,9077405..9077528,9077628..9077897)
Organism Tripterygium wilfordii
locus_tag HS088_TW06G00936

Protein

Length 688aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000006.1
Definition rhamnogalacturonate lyase B [Tripterygium wilfordii]
Locus_tag HS088_TW06G00936

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGACAGGAGGAGGATTGCACAGAATCATAGGCTGTTTTGGCGACTGCTCCGGAACCACCACTCAAACTCATGGGGATGTAAATGACAATCTTCATTGTGGTGGACTAGTTCGAAGAGAAAACGATAGCCTTACCATGCCACCTGCCAGGGTCCAACTGCACAGTCTTGATCGTCATGTGGTGATGGACAATGGCATACTTCAAGTCACGTTGTCAAAACCGGAGGGTATTGTCACTGGAGTACAATATGGTAGCATTAACAACGTGCTTGAAGTTCTTAACAACGAATCTAACAGAGGGTACTGGGATCTTCACTGGACTCCACCTGGTGGAAAAGGAATATTCGATGTGATCAAAGGAACAGATTTTAGGGTTATAGTTCATACTGAGGAGCAGGCTGAGCTGTCCTTTACCAGAATGTGGGATCCCTCCCAAGAGTGGAAGTACATTCCTCTGAATATAGATAAAAGGTTTGTAATGCTTCGTGGTTCCTCGGGTTTCTACTCATATGCCATTTATGAGCACTTGAAGGAGTGGCCTGGATTTGATCTTGGTGAAACGAGGATAACTTTCAAACTTAGAAAGGACAAGTTTCAGTACATGGCCATTGCAGATAATAGGCAAAGATTCATGCCCCTGCCTGATGACCGGTTAGCGGGAAGATGCCAAGCCCTAGCCTATCAGGAAGCTGTCCTACTTGTCAATCCCAAGGCACAAGAGCTCAAAGGAGAGGTGGATGACAAGTACCAATATTCGTGTGAGAACAAAGATATCCAGGTCCATGGGTGGATATCTTTCAATCCTCCAGTGGGATTCTGGCAAATAACACCCAGCAATGAGTTCCGAACTGGTGGGCCCCTGAAACAGAACTTAACATCACACGTTGGTTCTACCACCCTTGCAATGTTTCATAGTTCACATTATGCGGGAAAAGATCTTGTGCCAAGATTTGAAGCTCATGAGCCGTGGAAGAAAGTTTTTGGCCCTGTTTTCATCTATCTTAATTCTGCATCAAGTGGAGCTGATCCTCACTGGTTATGGGAGGACGCAAAAATACAGATGATGGCTGAAGTGCAAAGCTGGCCATATTGTTTTCCTGCTTCAGAGGATTTCCCCAAGGTAGAAGATCGGGGGAGTATATGTGGTAGACTACTAGTCCGAGATAGTTATGTCGGCAAGGACTATATTTTGGCAAATGGTGCTTATGTTGGTTTGGCGCCACCAGGAGAGGTTGGATCATGGCAAAGAGAATGCAAGGACTACCAATTCTGGACCAGGTCAGATGAAAATGGCTATTTCTTTATAAAGCATGTACGAGCTGGTAACTATAATCTTTATGCATGGGTCCCTGGTTTTATTGGAGATTACCGTGGTGATTTTGGCGTTACCATAACGTCAGGCTGTGATATTGATATGGGTGATCTTGTATACGAGCCTCCAAGAGATGGACCCACACTATGGGAGATAGGCATCCCTGATCGCTCTGCTGCAGAGTTTTATGTCCCTGACCCTGACCCGAAGTATATCAATAAACTTTTTGTTAATCATCCTGACAGGTTTCGGCAATATGGTTTGTGGGACAGATATGCAGATATATATCCTGATGAGGATTTGGTTTACACGGTTGGTGTTAGCAACTATAGCAAAGATTGGTTTTTTGCTCAGGTTGTCAGGAAGAAAGGTGATAACCTCGTAGGAACTAGCTGGCAAATTAAATTCAAACTTGAGAATGCAGATCGCAATGCTACCTACAAACTGCGAGTGGCTCTTGCATCTGCAACTCTGGCAGAATTACAGGTTAGAGTTAATGATCCAAACACAAAACGCCCTCTGTTTTCAAGCGGACTGATAGGGAGGGACAATTCGATTGCAAGACTCGGGATTCACGGGCTCTACTGGCTGTATAATGTGAATATACCAGGCACTCAACTTGTTGAAGGGGAGAACACCATCTTCCTCACGCAACCAAGATGCACCAGCCCTTTTCAAGGTATTATGTATGACTATATTCGTCTGGAAGAGCCTCCCCGTTCGAATTCCATGCAGGATCCTTCCTGTTCATCTTAG
Protein:  
MTGGGLHRIIGCFGDCSGTTTQTHGDVNDNLHCGGLVRRENDSLTMPPARVQLHSLDRHVVMDNGILQVTLSKPEGIVTGVQYGSINNVLEVLNNESNRGYWDLHWTPPGGKGIFDVIKGTDFRVIVHTEEQAELSFTRMWDPSQEWKYIPLNIDKRFVMLRGSSGFYSYAIYEHLKEWPGFDLGETRITFKLRKDKFQYMAIADNRQRFMPLPDDRLAGRCQALAYQEAVLLVNPKAQELKGEVDDKYQYSCENKDIQVHGWISFNPPVGFWQITPSNEFRTGGPLKQNLTSHVGSTTLAMFHSSHYAGKDLVPRFEAHEPWKKVFGPVFIYLNSASSGADPHWLWEDAKIQMMAEVQSWPYCFPASEDFPKVEDRGSICGRLLVRDSYVGKDYILANGAYVGLAPPGEVGSWQRECKDYQFWTRSDENGYFFIKHVRAGNYNLYAWVPGFIGDYRGDFGVTITSGCDIDMGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPDPKYINKLFVNHPDRFRQYGLWDRYADIYPDEDLVYTVGVSNYSKDWFFAQVVRKKGDNLVGTSWQIKFKLENADRNATYKLRVALASATLAELQVRVNDPNTKRPLFSSGLIGRDNSIARLGIHGLYWLYNVNIPGTQLVEGENTIFLTQPRCTSPFQGIMYDYIRLEEPPRSNSMQDPSCSS